BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B11LP1|AL427123
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig331 1883 0.0
>3x_Contig331
Length = 1863
Score = 1883 bits (949), Expect = 0.0
Identities = 964/967 (99%), Gaps = 2/967 (0%)
Strand = Plus / Plus
Query: 1 gatctcctaaaatctccaccactaggtagtgatgtaagtatcaacaccgggtctgattcc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 856 gatctcctaaaatctccaccactagg-agtgatgtaagtatcaacaccgggtctgattcc 914
Query: 61 attagagacgtataaatggatgccttcttacgagttttctaatgataccaatggtctttc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 attagagacgta-aaatggatgccttcttacgagttttctaatgataccaatggtctttc 973
Query: 121 aaacagacatttcaaatttgccagtgtgcatgactctggattattattgaagtttgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 aaacagacatttcaaatttgccagtgtgcatgactctggattattattgaagtttgattt 1033
Query: 181 gagacaaccaaaccaagctgaaaaaaagattaatgcacattctggtcccgccttatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 gagacaaccaaaccaagctgaaaaaaagattaatgcacattctggtcccgccttatgttt 1093
Query: 241 gaattggcatccgcatcaggactacattattagtggtggaagagacggaaaatgttgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gaattggcatccgcatcaggactacattattagtggtggaagagacggaaaatgttgctt 1153
Query: 301 gtggtatgtaggcgacaaatctaatcaagttggtaacattagtagtaccaacctcaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 gtggtatgtaggcgacaaatctaatcaagttggtaacattagtagtaccaacctcaattc 1213
Query: 361 aagtaatccagcaacgcataatttatcatcatcataccccttggggctatccaacaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 aagtaatccagcaacgcataatttatcatcatcataccccttggggctatccaacaccct 1273
Query: 421 tgcatttcctgagctcacaataaataccgctcgttccatgaataaacttaagtttcgtcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 tgcatttcctgagctcacaataaataccgctcgttccatgaataaacttaagtttcgtcc 1333
Query: 481 aaaatatgagacgaatgtattcaattcattgattgggacttcatccatgggcgaagattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 aaaatatgagacgaatgtattcaattcattgattgggacttcatccatgggcgaagattc 1393
Query: 541 ggatgtatctgtttattcgctagcaagaaaatatattcctaaaaacgttattgcttccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 ggatgtatctgtttattcgctagcaagaaaatatattcctaaaaacgttattgcttccag 1453
Query: 601 tgcaccttctgttggttttgtctggtgggatgacgacacgatattcaatatagacaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 tgcaccttctgttggttttgtctggtgggatgacgacacgatattcaatatagacaagca 1513
Query: 661 aaataccgttactgggtgggatatctctcatgaaccgactgtacttgataatttgccgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 aaataccgttactgggtgggatatctctcatgaaccgactgtacttgataatttgccgaa 1573
Query: 721 aaacacaataaaatggagagatttggatggcgatggtattctgtttttggaccaaaaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 aaacacaataaaatggagagatttggatggcgatggtattctgtttttggaccaaaaacc 1633
Query: 781 aggtgggtatttgtctcaagaagagacagttttgacaccaggtagtggagagaatcgcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 aggtgggtatttgtctcaagaagagacagttttgacaccaggtagtggagagaatcgcaa 1693
Query: 841 gatgcctttcacacacagaatgagtagtgcactgctaacagttttactggaggaaataat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 gatgcctttcacacacagaatgagtagtgcactgctaacagttttactggaggaaataat 1753
Query: 901 cctaacattacaagcaacamaagtagcagtgccgcaagtttctcaaaaaacccgacactt 960
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 cctaacattacaagcaacacaagtagcagtgccgcaagtttctcaaaaaacccgacactt 1813
Query: 961 ggcatgt 967
|||||||
Sbjct: 1814 ggcatgt 1820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6989
Number of Sequences: 1807
Number of extensions: 6989
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)